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图像处理和培养神经元骨架重构

Image Processing and Reconstruction of Cultured Neuron Skeletons
作者:Donggang YuTuan D. PhainJesse S. JinSnhuai LnoHong YanDenis I. Crane 加工时间:2014-07-18 信息来源:科技报告(Other) 索取原文[36 页]
关键词:神经元细胞图像;图像分割;灰色和距离差;滤波窗口
摘 要:One approach to investigating neural death is through systematic studies of the changing morphology of cultured brain neurons in response to cellular challenges. Image segmentation and neuron skeleton reconstruction methods developed to date to analyze such changes have been limited by the low contrast of cells. In this paper we present new algorithms that successfully circumvent these problems. The binary method is based on logical analysis of grey and distance difference of images. The spurious regions are detected and removed through use of a hierarchical window filter. The skeletons of binary cell images are extracted. The extension direction and connection points of broken cell skeletons are automatically determined, and broken neural skeletons are reconstructed. The spurious strokes are deleted based on cell prior knowledge. The reconstructed skeletons are processed furthermore by filling holes, smoothing and extracting new skeletons. The final constructed neuron skeletons are analyzed and calculated to find the length and morphology of skeleton branches automatically. The efficacy of the developed algorithms is demonstrated here through a test of cultured brain neurons from newborn mice.
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